Comparison table of ensemble IDs and hugo gene symbols
Introduction
Do not require additional dependencies, follow this comparison table to merge to switch between ensemble ID and gene symbol
Description
The update time is unknown, the current number of genes in it is 32738
download link
Link:https://pan.baidu.com/s/1Kebn7A6bm5_0XUUvQJSXtA
Extraction code:az7l
Or use R package
library(org.Hs.eg.db)
gene <- "TP53"
gene_names = mapIds(x = org.Hs.eg.db,keys = gene,column = "GENENAME",keytype = "SYMBOL", multiVals="first")
# Here GENeNAME can be replaced by follows:
#ACCNUM,ALIAS,ENSEMBL,ENSEMBLPROT,ENSEMBLTRANS,ENTREZID,ENZYME
#EVIDENCE,EVIDENCEALL,GENENAME,GENETYPE,GO,GOALL,IPI,MAP,
#OMIM,ONTOLOGY,ONTOLOGYALL,PATH,PFAM,PMID,PROSITE,REFSEQ,
#SYMBOL,UCSCKG,UNIPROT
library(org.Hs.eg.db)
library(data.table)
xx <- unlist(as.list(org.Hs.egALIAS2EG))
map_dt <- data.table(Symbol = names(xx), ID = xx)
map_dt <- map_dt[!duplicated(Symbol),]
Gene_ID <- map_dt[data.table(Symbol = gene),ID, on = "Symbol"]